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PCDHB3 Antibody (N-term) Blocking peptide

Synthetic peptide

     
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Product Information
Primary Accession Q9Y5E6
Clone Names 101008108
Peptide ID 101008108
Additional Information
Other Names Protocadherin beta-3, PCDH-beta-3, PCDHB3
Format Synthetic peptide was lyophilized with 100% acetonitrile and is supplied as a powder. Reconstitute with 0.1 ml DI water for a final concentration of 1 mg/ml.
StorageMaintain refrigerated at 2-8°C for up to 6 months. For long term storage store at -20°C.
PrecautionsThis product is for research use only. Not for use in diagnostic or therapeutic procedures.
Protein Information
Name PCDHB3
Function Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.
Cellular Location Cell membrane; Single-pass type I membrane protein EMBL; AF152496; AAD43757.1; -; mRNA EMBL; AF217755; AAK51622.1; -; mRNA EMBL; AK313451; BAG36239.1; -; mRNA EMBL; CH471062; EAW61981.1; -; Genomic_DNA CCDS; CCDS4245.1; - RefSeq; NP_061760.1; NM_018937.4 UniGene; Hs.508987; - UniGene; Hs.674730; - UniGene; Hs.708778; - ProteinModelPortal; Q9Y5E6; - SMR; Q9Y5E6; - BioGrid; 121072; 19 STRING; 9606.ENSP00000231130; - GlyConnect; 1682; - iPTMnet; Q9Y5E6; - PhosphoSitePlus; Q9Y5E6; - BioMuta; PCDHB3; - DMDM; 13431377; - EPD; Q9Y5E6; - jPOST; Q9Y5E6; - PaxDb; Q9Y5E6; - PeptideAtlas; Q9Y5E6; - PRIDE; Q9Y5E6; - ProteomicsDB; 86345; - Ensembl; ENST00000231130; ENSP00000231130; ENSG00000113205 GeneID; 56132; - KEGG; hsa:56132; - UCSC; uc003lio.5; human CTD; 56132; - EuPathDB; HostDB:ENSG00000113205.5; - GeneCards; PCDHB3; - H-InvDB; HIX0032374; - HGNC; HGNC:8688; PCDHB3 HPA; HPA050296; - MIM; 604967; gene MIM; 606329; gene neXtProt; NX_Q9Y5E6; - PharmGKB; PA33037; - eggNOG; KOG3594; Eukaryota eggNOG; ENOG410XQHI; LUCA HOGENOM; HOG000220892; - HOVERGEN; HBG054878; - InParanoid; Q9Y5E6; - KO; K16494; - OrthoDB; 300321at2759; - PhylomeDB; Q9Y5E6; - TreeFam; TF332299; - GeneWiki; PCDHB3; - GenomeRNAi; 56132; - PRO; PR:Q9Y5E6; - Proteomes; UP000005640; Chromosome 5 Bgee; ENSG00000113205; Expressed in 96 organ(s), highest expression level in testis ExpressionAtlas; Q9Y5E6; baseline and differential Genevisible; Q9Y5E6; HS GO; GO:0016021; C:integral component of membrane; NAS:UniProtKB GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central GO; GO:0005509; F:calcium ion binding; IEA:InterPro GO; GO:0016339; P:calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules; NAS:UniProtKB GO; GO:0007155; P:cell adhesion; IBA:GO_Central GO; GO:0007268; P:chemical synaptic transmission; TAS:UniProtKB GO; GO:0007156; P:homophilic cell adhesion via plasma membrane adhesion molecules; IEA:InterPro GO; GO:0007399; P:nervous system development; TAS:ProtInc GO; GO:0007416; P:synapse assembly; TAS:UniProtKB InterPro; IPR002126; Cadherin-like_dom InterPro; IPR015919; Cadherin-like_sf InterPro; IPR032455; Cadherin_C InterPro; IPR020894; Cadherin_CS InterPro; IPR013164; Cadherin_N InterPro; IPR030735; PCDHB2/3 PANTHER; PTHR24028:SF77; PTHR24028:SF77; 1 Pfam; PF00028; Cadherin; 5 Pfam; PF08266; Cadherin_2; 1 Pfam; PF16492; Cadherin_C_2; 1 PRINTS; PR00205; CADHERIN SMART; SM00112; CA; 6 SUPFAM; SSF49313; SSF49313; 6 PROSITE; PS00232; CADHERIN_1; 5 PROSITE; PS50268; CADHERIN_2; 6 2: Evidence at transcript level; Calcium; Cell adhesion; Cell membrane; Complete proteome; Glycoprotein; Membrane; Polymorphism; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix SIGNAL 1 26 CHAIN 27 796 Protocadherin beta-3 /FTId=PRO_0000003918 TOPO_DOM 27 690 Extracellular. TRANSMEM 691 711 Helical. TOPO_DOM 712 796 Cytoplasmic. DOMAIN 35 133 Cadherin 1. {ECO:0000255|PROSITE- ProRule:PRU00043} DOMAIN 138 242 Cadherin 2. {ECO:0000255|PROSITE- ProRule:PRU00043} DOMAIN 247 347 Cadherin 3. {ECO:0000255|PROSITE- ProRule:PRU00043} DOMAIN 352 451 Cadherin 4. {ECO:0000255|PROSITE- ProRule:PRU00043} DOMAIN 456 561 Cadherin 5. {ECO:0000255|PROSITE- ProRule:PRU00043} DOMAIN 568 671 Cadherin 6. {ECO:0000255|PROSITE- ProRule:PRU00043} CARBOHYD 169 169 N-linked (GlcNAc...) asparagine CARBOHYD 418 418 N-linked (GlcNAc...) asparagine CARBOHYD 436 436 N-linked (GlcNAc...) asparagine CARBOHYD 567 567 N-linked (GlcNAc...) asparagine VARIANT 41 41 K -> R (in dbSNP:rs31849) /FTId=VAR_024391 VARIANT 207 207 E -> K (in dbSNP:rs12515688) /FTId=VAR_033703 VARIANT 414 414 R -> S (in dbSNP:rs3733699) /FTId=VAR_020366 SEQUENCE 796 AA; 86773 MW; F586CF1BC3A2B0D2 CRC64; MEAGGERFLR QRQVLLLFVF LGGSLAGSES RRYSVAEEKE KGFLIANLAK DLGLRVEELA ARGAQVVSKG NKQHFQLSHQ TGDLLLNEKL DREELCGPTE PCILHFQILL QNPLQFVTNE LRIIDVNDHS PVFFENEMHL KILESTLPGT VIPLGNAEDL DVGRNSLQNY TITPNSHFHV LTRSRRDGRK YPELVLDKAL DREEQPELSL TLTALDGGSP PRSGTAQINI QVLDINDNAP EFAQPLYEVA VLENTPVNSV IVTVSASDLD TGSFGTISYA FFHASEEIRK TFQLNPITGD MQLVKYLNFE AINSYEVDIE AKDGGGLSGK STVIVQVVDV NDNPPELTLS SVNSPIPENS GETVLAVFSV SDLDSGDNGR VMCSIENNLP FFLKPSVENF YTLVSEGALD RETRSEYNIT ITITDLGTPR LKTKYNITVL VSDVNDNAPA FTQISYTLFV RENNSPALHI GSVSATDRDS GTNAQVTYSL LPPQDPHLPL SSLVSINADN GHLFALRSLD YEALQAFEFR VGATDRGSPA LSSEALVRVL VLDANDNSPF VLYPLQNGSA PCTELVPRAA EPGYLVTKVV AVDGDSGQNA WLSYQLLKAT EPGLFGVWAH NGEVRTARLL SERDAAKHRL VVLVKDNGEP PRSATATLHV LLVDGFSQPY LPLPEAAPAQ AQADLLTVYL VVALASVSSL FLFSVLLFVA VRLCRRSRAA SVGRCSVPEG PFPGQMVDVS GTGTLSQSYQ YEVCLTGGSG TNEFKFLKPI IPNFVAQGAE RVSEANPSFR KSFEFS
Research Areas
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Background

This gene is a member of the protocadherin beta genecluster, one of three related gene clusters tandemly linked onchromosome five. The gene clusters demonstrate an unusual genomicorganization similar to that of B-cell and T-cell receptor geneclusters. The beta cluster contains 16 genes and 3 pseudogenes,each encoding 6 extracellular cadherin domains and a cytoplasmictail that deviates from others in the cadherin superfamily. Theextracellular domains interact in a homophilic manner to specifydifferential cell-cell connections. Unlike the alpha and gammaclusters, the transcripts from these genes are made up of only onelarge exon, not sharing common 3' exons as expected. These neuralcadherin-like cell adhesion proteins are integral plasma membraneproteins. Their specific functions are unknown but they most likelyplay a critical role in the establishment and function of specificcell-cell neural connections.

References

Frank, M., et al. Curr. Opin. Cell Biol. 14(5):557-562(2002)Vanhalst, K., et al. FEBS Lett. 495 (1-2), 120-125 (2001) :Wu, Q., et al. Genome Res. 11(3):389-404(2001)Nollet, F., et al. J. Mol. Biol. 299(3):551-572(2000)Yagi, T., et al. Genes Dev. 14(10):1169-1180(2000)

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Cat# BP12159a
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