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>   home   >   Products   >   Peptides   >   Blocking Peptides   >   PCDHB5 Antibody (Center) Blocking Peptide   

PCDHB5 Antibody (Center) Blocking Peptide

Synthetic peptide

Product Information
Primary Accession Q9Y5E4
Clone Names 100405076
Peptide ID 100405076
Additional Information
Other Names Protocadherin beta-5, PCDH-beta-5, PCDHB5
Target/Specificity The synthetic peptide sequence used to generate the antibody AP13230c was selected from the Center region of PCDHB5. A 10 to 100 fold molar excess to antibody is recommended. Precise conditions should be optimized for a particular assay.
Format Synthetic peptide was lyophilized with 100% acetonitrile and is supplied as a powder. Reconstitute with 0.1 ml DI water for a final concentration of 1 mg/ml.
StorageMaintain refrigerated at 2-8°C for up to 6 months. For long term storage store at -20°C.
PrecautionsThis product is for research use only. Not for use in diagnostic or therapeutic procedures.
Protein Information
Function Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.
Cellular Location Cell membrane; Single-pass type I membrane protein EMBL; AF152498; AAD43759.1; -; mRNA EMBL; AF134474; AAP97251.1; -; mRNA EMBL; AF217753; AAK51620.1; -; mRNA EMBL; BC001186; AAH01186.1; -; mRNA EMBL; AL117449; CAB55933.1; -; mRNA CCDS; CCDS4247.1; - PIR; T17243; T17243 RefSeq; NP_056484.2; NM_015669.4 UniGene; Hs.119693; - ProteinModelPortal; Q9Y5E4; - SMR; Q9Y5E4; - BioGrid; 117593; 11 IntAct; Q9Y5E4; 2 STRING; 9606.ENSP00000231134; - GlyConnect; 1683; - iPTMnet; Q9Y5E4; - PhosphoSitePlus; Q9Y5E4; - BioMuta; PCDHB5; - DMDM; 13431375; - EPD; Q9Y5E4; - jPOST; Q9Y5E4; - PaxDb; Q9Y5E4; - PeptideAtlas; Q9Y5E4; - PRIDE; Q9Y5E4; - ProteomicsDB; 86343; - DNASU; 26167; - Ensembl; ENST00000231134; ENSP00000231134; ENSG00000113209 GeneID; 26167; - KEGG; hsa:26167; - UCSC; uc003liq.5; human CTD; 26167; - EuPathDB; HostDB:ENSG00000113209.8; - GeneCards; PCDHB5; - HGNC; HGNC:8690; PCDHB5 HPA; HPA013191; - MIM; 604967; gene MIM; 606331; gene neXtProt; NX_Q9Y5E4; - PharmGKB; PA33039; - eggNOG; KOG3594; Eukaryota eggNOG; ENOG410XQHI; LUCA HOVERGEN; HBG054878; - InParanoid; Q9Y5E4; - KO; K16494; - OrthoDB; 300321at2759; - PhylomeDB; Q9Y5E4; - TreeFam; TF332299; - ChiTaRS; PCDHB5; human GeneWiki; PCDHB5; - GenomeRNAi; 26167; - PRO; PR:Q9Y5E4; - Proteomes; UP000005640; Chromosome 5 Bgee; ENSG00000113209; Expressed in 127 organ(s), highest expression level in parietal pleura ExpressionAtlas; Q9Y5E4; baseline and differential Genevisible; Q9Y5E4; HS GO; GO:0016021; C:integral component of membrane; NAS:UniProtKB GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central GO; GO:0005509; F:calcium ion binding; IEA:InterPro GO; GO:0016339; P:calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules; NAS:UniProtKB GO; GO:0007155; P:cell adhesion; IBA:GO_Central GO; GO:0007268; P:chemical synaptic transmission; TAS:UniProtKB GO; GO:0007156; P:homophilic cell adhesion via plasma membrane adhesion molecules; IEA:InterPro GO; GO:0007416; P:synapse assembly; TAS:UniProtKB InterPro; IPR002126; Cadherin-like_dom InterPro; IPR015919; Cadherin-like_sf InterPro; IPR032455; Cadherin_C InterPro; IPR020894; Cadherin_CS InterPro; IPR013164; Cadherin_N InterPro; IPR030730; PCDHB5 PANTHER; PTHR24028:SF90; PTHR24028:SF90; 1 Pfam; PF00028; Cadherin; 5 Pfam; PF08266; Cadherin_2; 1 Pfam; PF16492; Cadherin_C_2; 1 PRINTS; PR00205; CADHERIN SMART; SM00112; CA; 5 SUPFAM; SSF49313; SSF49313; 6 PROSITE; PS00232; CADHERIN_1; 5 PROSITE; PS50268; CADHERIN_2; 6 2: Evidence at transcript level; Acetylation; Calcium; Cell adhesion; Cell membrane; Complete proteome; Glycoprotein; Membrane; Polymorphism; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix SIGNAL 1 30 CHAIN 31 795 Protocadherin beta-5 /FTId=PRO_0000003922 TOPO_DOM 31 689 Extracellular. TRANSMEM 690 710 Helical. TOPO_DOM 711 795 Cytoplasmic. DOMAIN 35 133 Cadherin 1. {ECO:0000255|PROSITE- ProRule:PRU00043} DOMAIN 138 242 Cadherin 2. {ECO:0000255|PROSITE- ProRule:PRU00043} DOMAIN 247 346 Cadherin 3. {ECO:0000255|PROSITE- ProRule:PRU00043} DOMAIN 351 450 Cadherin 4. {ECO:0000255|PROSITE- ProRule:PRU00043} DOMAIN 455 560 Cadherin 5. {ECO:0000255|PROSITE- ProRule:PRU00043} DOMAIN 567 670 Cadherin 6. {ECO:0000255|PROSITE- ProRule:PRU00043} MOD_RES 296 296 N6-acetyllysine {ECO:0000250|UniProtKB:Q9Y5E7} CARBOHYD 169 169 N-linked (GlcNAc...) asparagine CARBOHYD 417 417 N-linked (GlcNAc...) asparagine CARBOHYD 435 435 N-linked (GlcNAc...) asparagine CARBOHYD 566 566 N-linked (GlcNAc...) asparagine VARIANT 156 156 I -> T (in dbSNP:rs17096901) /FTId=VAR_033704 VARIANT 720 720 S -> P (in dbSNP:rs400562) /FTId=VAR_048552 SEQUENCE 795 AA; 86423 MW; 06F743580DC65B64 CRC64; METALAKTPQ KRQVMFLAIL LLLWEAGSEA VRYSIPEETE SGYSVANLAK DLGLGVGELA TRGARMHYKG NKELLQLDIK TGNLLLYEKL DREVMCGATE PCILHFQLLL ENPVQFFQTD LQLTDINDHA PEFPEKEMLL KIPESTQPGT VFPLKIAQDF DIGSNTVQNY TISPNSHFHV ATHNRGDGRK YPELVLDKAL DREERPELSL TLTALDGGAP PRSGTTTIRI VVLDNNDNAP EFLQSFYEVQ VPENSPLNSL VVVVSARDLD AGAYGSVAYA LFQGDEVTQP FVIDEKTAEI RLKRALDFEA TPYYNVEIVA TDGGGLSGKC TVAIEVVDVN DNAPELTMST LSSPTPENAP ETVVAVFSVS DPDSGDNGRM ICSIQNDLPF LLKPTLKNFY TLVTQRTLDR ESQAEYNITI TVTDMGTPRL KTEHNITVLV SDVNDNAPAF TQTSYTLFVR ENNSPALHIG SVSATDRDSG TNAQVTYSLL PPQNPHLRLA SLVSINADNG HLFALRSLDY EALQAFEFRV GATDRGSPAL SSEALVRVLV LDANDNSPFV LYPLQNGSAP CTELVPRAAE PGYLVTKVVA VDGDSGQNAW LSYQLLKATE PGLFSMWAHN GEVRTARLLS ERDAAKHRLV VLVKDNGEPP RSATATLHVL LVDGFSQPYL PLPEAAPAQA QADSLTVYLV VALASVSSLF LFSVLLFVAV RLCRRSRAAS VGRCSVPEGP FPGHLVDVSG TGTLSQSYHY EVCLTGDSGA GEFKFLKPII PNLLPQGAGE EIGKTAAFRN SFGLN
Research Areas
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This gene is a member of the protocadherin beta genecluster, one of three related gene clusters tandemly linked onchromosome five. The gene clusters demonstrate an unusual genomicorganization similar to that of B-cell and T-cell receptor geneclusters. The beta cluster contains 16 genes and 3 pseudogenes,each encoding 6 extracellular cadherin domains and a cytoplasmictail that deviates from others in the cadherin superfamily. Theextracellular domains interact in a homophilic manner to specifydifferential cell-cell connections. Unlike the alpha and gammaclusters, the transcripts from these genes are made up of only onelarge exon, not sharing common 3' exons as expected. These neuralcadherin-like cell adhesion proteins are integral plasma membraneproteins. Their specific functions are unknown but they most likelyplay a critical role in the establishment and function of specificcell-cell neural connections.


Ewing, R.M., et al. Mol. Syst. Biol. 3, 89 (2007) :Frank, M., et al. Curr. Opin. Cell Biol. 14(5):557-562(2002)Vanhalst, K., et al. FEBS Lett. 495 (1-2), 120-125 (2001) :Wu, Q., et al. Genome Res. 11(3):389-404(2001)Nollet, F., et al. J. Mol. Biol. 299(3):551-572(2000)

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Cat# BP13230c
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